Computational Tools

Web-enabled ecological group analysis (web-based vegan). Supports the analysis and visualization of trends in dispersal, diversity, and taxonomy as well …

Web server for RNA-seq analysis - going from raw data to therapeutic insights. Supports FASTQ or count matrix input. Provides …

Automated NMR metabolome data processing tool. Processes samples at approximately 1 minute per sample.

Automated metabolome data processing tool for GC-MS data. Ultra-fast processing at approximately 10 seconds per sample.

Automated metabolome data processing tool for LC-MS data. Processes samples at approximately 1 minute per sample using AI techniques.

A comprehensive web-based tool for statistical and functional analysis of metabolomic data. Offers end-to-end solutions from untargeted MS metabolomic data …

Retention Index predictor is a web server that uses machine learning to predict the Kovats' Retention Index (RI) of compounds …

Retention Time Predictor is a web server that takes a submitted structure and uses ML to accurately predict the retention …

A bidirectional neural network to predict EI-MS spectra. Outperforms NEIMS with improved parent ion intensity prediction and is able to …

Predicts "biofeasible" transformation products using ML methods and a large database of chemical constraints. Capable of performing Phase I, Phase …

Web-based Eukaryotic genome annotation system. Fast (30 sec – 3 minutes per genome), interactive genome and circos plots. Provides 60-65 …

A complete Nextflow pipeline for RNA-seq analysis packaged with Docker containers. Includes quality control, alignment, quantification, and differential expression analysis.